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Creators/Authors contains: "Liang, Chenyu"

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  1. ABSTRACT Predator‐prey models, such as the Leslie‐Gower model, are essential for understanding population dynamics and stability within ecosystems. These models help explain the balance between species under natural conditions, but the inclusion of factors like the Allee effect and intraspecific competition adds complexity and realism to these interactions, enhancing our ability to predict system behavior under stress. To detect early indicators of population collapse, this study investigates the intricate dynamics of a modified Leslie‐Gower predator‐prey model with both Allee effect and intraspecific competition. We analyze the existence and stability of equilibria, as well as bifurcation phenomena, including saddle‐node bifurcations of codimension 2, Hopf bifurcations of codimension 2, and Bogdanov‐Takens bifurcations of codimension at least 4. Detailed transitions between bifurcation curves–specifically saddle‐node, Hopf, homoclinic, and limit cycle bifurcations–are also examined. We observe a novel transition phenomenon, where a system jumps from saddle‐node bifurcation to homoclinic and limit cycle bifurcations. This suggests that burst oscillations may serve as an early warning of system collapse rather than simply a tipping point. Our findings indicate that moderate levels of intraspecific competition or Allee effect support coexistence of both populations, while excessive levels may destabilize the entire biological system, leading to collapse. These insights offer valuable implications for ecological management and the early detection of risks in population dynamics. 
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    Free, publicly-accessible full text available July 7, 2026
  2. Long-range intercellular communication is essential for multicellular biological systems to regulate multiscale cell–cell interactions and maintain life. Growing evidence suggests that intercellular calcium waves (ICWs) act as a class of long-range signals that influence a broad spectrum of cellular functions and behaviors. Importantly, mechanical signals, ranging from single-molecule-scale to tissue-scale in vivo, can initiate and modulate ICWs in addition to relatively well-appreciated biochemical and bioelectrical signals. Despite these recent conceptual and experimental advances, the full nature of underpinning mechanotransduction mechanisms by which cells convert mechanical signals into ICW dynamics remains poorly understood. This review provides a systematic analysis of quantitative ICW dynamics around three main stages: initiation, propagation, and regeneration/relay. We highlight the landscape of upstream molecules and organelles that sense and respond to mechanical stimuli, including mechanosensitive membrane proteins and cytoskeletal machinery. We clarify the roles of downstream molecular networks that mediate signal release, spread, and amplification, including adenosine triphosphate (ATP) release, purinergic receptor activation, and gap junction (GJ) communication. Furthermore, we discuss the broad pathophysiological implications of ICWs, covering pathophysiological processes such as cancer metastasis, tissue repair, and developmental patterning. Finally, we summarize recent advances in optical imaging and artificial intelligence (AI)/machine learning (ML) technologies that reveal the precise spatial-temporal-functional dynamics of ICWs and ATP waves. By synthesizing these insights, we offer a comprehensive framework of ICW mechanobiology and propose new directions for mechano-therapeutic strategies in disease diagnosis, cancer immunotherapies, and drug discovery. 
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    Free, publicly-accessible full text available June 1, 2026
  3. In this paper, we investigated the dynamics of the interaction between Microcystis aeruginosa and filter-feeding fish in a new aquatic ecological model and considered the effects of aggregation and harvesting and focused on studying the critical threshold conditions through the analysis of saddle-node bifurcation, Hopf bifurcation, and Bogdanov–Takens bifurcation. We also conducted numerical simulations to illustrate our findings and provided biological interpretations. The results obtained indicate that the aggregation effect or harvesting can disrupt the coexistence of Microcystis aeruginosa and filter-feeding fish. The filter-feeding fish population may go extinct while the Microcystis aeruginosa population could survive. We identified the importance of finding an appropriate timing for harvesting Microcystis aeruginosa in order to promote the growth of the filter-feeding fish population. This optimal timing may be influenced by the carrying capacity of Microcystis aeruginosa. Taken together, our study sheds light on the dynamics of Microcystis aeruginosa and filter-feeding fish in an aquatic ecosystem, highlighting the critical role of aggregation, harvesting, and timing in determining the coexistence and survival of these species. 
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  4. Abstract Evidence from physical sciences in oncology increasingly suggests that the interplay between the biophysical tumor microenvironment and genetic regulation has significant impact on tumor progression. Especially, tumor cells and the associated stromal cells not only alter their own cytoskeleton and physical properties but also remodel the microenvironment with anomalous physical properties. Together, these altered mechano-omics of tumor tissues and their constituents fundamentally shift the mechanotransduction paradigms in tumorous and stromal cells and activate oncogenic signaling within the neoplastic niche to facilitate tumor progression. However, current findings on tumor biophysics are limited, scattered, and often contradictory in multiple contexts. Systematic understanding of how biophysical cues influence tumor pathophysiology is still lacking. This review discusses recent different schools of findings in tumor biophysics that have arisen from multi-scale mechanobiology and the cutting-edge technologies. These findings range from the molecular and cellular to the whole tissue level and feature functional crosstalk between mechanotransduction and oncogenic signaling. We highlight the potential of these anomalous physical alterations as new therapeutic targets for cancer mechanomedicine. This framework reconciles opposing opinions in the field, proposes new directions for future cancer research, and conceptualizes novel mechanomedicine landscape to overcome the inherent shortcomings of conventional cancer diagnosis and therapies. 
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  5. An increasing number of studies have demonstrated the significant roles of the interplay between microenvironmental mechanics in tissues and biochemical-genetic activities in resident tumor cells at different stages of tumor progression. Mediated by molecular mechano-sensors or -transducers, biomechanical cues in tissue microenvironments are transmitted into the tumor cells and regulate biochemical responses and gene expression through mechanotransduction processes. However, the molecular interplay between the mechanotransduction processes and intracellular biochemical signaling pathways remains elusive. This paper reviews the recent advances in understanding the crosstalk between biomechanical cues and three critical biochemical effectors during tumor progression: calcium ions (Ca 2+ ), yes-associated protein (YAP), and microRNAs (miRNAs). We address the molecular mechanisms underpinning the interplay between the mechanotransduction pathways and each of the three effectors. Furthermore, we discuss the functional interactions among the three effectors in the context of soft matter and mechanobiology. We conclude by proposing future directions on studying the tumor mechanobiology that can employ Ca 2+ , YAP, and miRNAs as novel strategies for cancer mechanotheraputics. This framework has the potential to bring insights into the development of novel next-generation cancer therapies to suppress and treat tumors. 
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  7. An analytic theory for dual-input outphasing power amplifiers that incorporate in one unified treatment, the continuum of solutions for power combining including the Doherty and Chireix modes is presented. This unified theory developed at the current-source reference planes reveals the performance trade-off achieved by all of the possible power amplifier (PA) combiners within the continuum of solutions. Furthermore, it identifies a novel type of dual-input hybrid Chireix-Doherty PA that combines key features of the Doherty and Chireix operations such that the fundamental drain voltages applied to both the main and auxiliary transistors remain constant. This hybrid PA relies on an input outphasing angle varying with the input power level to obtain the correct load modulation behavior. A 2-GHz dual-input hybrid Chireix-Doherty PA is implemented using nonlinear embedding and experimentally evaluated to validate the theory. A drain efficiency of 61% at 9-dB backoff power and a maximum output power of about 43 dBm are obtained for continuous-wave (CW) measurements. The efficiency increases monotonously with output power unlike that of the Doherty PA used for comparison. When excited with a 20-MHz LTE signal with 9.5-dB peak-to-average power ratio (PAPR), the dual-input PA yields a 60.0% average drain efficiency and -48.1-dBc adjacent-channel power-leakage ratio (ACLR) after linearization. 
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